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… To search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial …

… at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome … funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 and DBI-2047598 to K.A. We …

… that enable organisms to swim around. However, genome and metagenomic sequencing conducted by the U.S. Department of … The work (proposal:  https://doi.org/10.46936/10.25585/60000691 , and  https://doi.org/10.46936/10.25585/60007554 ) conducted by the U.S. Department of Energy …

… and Liability Act (CERCLA) was enacted by Congress in 1980 for Superfund sites which are hazardous waste areas that … Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of Energy …

… PLoS Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … enhancer atlas of the developing telencephalon. Cell 152, 895-908. Gross SM, Martin JA, Simpson J, Abraham-Juarez MJ, … Tringe SG, Visel A , Woyke T, Wang Z, Rubin EM (2011). Metagenomic discovery of biomass-degrading genes and genomes …

… were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …

… He and  Tringe were also involved in a study that applied metagenomic capabilities to  studying phytoplankton …

… include six more species, so in total, we are looking at 18 different species, which included over 2000 RNA Seq … community is of utmost importance. The scope of handling 18 different species is beyond the capacity of a single lab. … Avinash: It has been publicly available since 2018. There were more than 15 citations even before this was …

… to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community Science … using more traditional methods. Thus far 25 terabases of metagenome data have been sequenced and assembled through the …

… sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is … and Environmental Research (DE-SC0004632, DE-SC0010580, DE-SC0016440), and acknowledge the IsoGenie Project …