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Metabolic interactions underpinning high methane fluxes across terrestrial freshwater wetlands
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Activity-targeted metaproteomics uncovers rare syntrophic bacteria central to anaerobic community metabolism
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon … than 5% of land on Earth, peatlands store approximately one-third of the world’s soil carbon. The process to harvest … by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 … to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … upstream and downstream, which is how the EPA, it’s one of the indices they use for stream health, they look at …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine … for dozens of complex compounds, but stay largely dormant under standard conditions. As described in a recent … Identifying specific genes, regulatory elements and metabolic pathways that enable that shift provides engineers …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at … a protein , PtrbHLH011, within poplar involved in plant growth, lignin production, and disease resistance.  The … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … a joint research call. Submitted proposals addressed one of the following focus topic areas: Biofuels and …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. … half of which are first-time PIs on a JGI proposal,” said Tanja Woyke , JGI’s deputy of User Programs. “The proposed … in: sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry. You can …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant … Serrano et al. 2024.  Spatial co-transcriptomics reveals …
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