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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … biosynthetic gene cluster annotation by leveraging a large genomic model ” Leonel Gonzalez : “It’s been great having …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and … and also photosynthesis genes including potential light-driven proton pumps. “We’re seeing that this is likely a …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen …
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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Fourteen genome sequences from bacterial, environmental isolates from the Cotton Glacier stream, Antarctica
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Seven genome sequences of bacterial environmental isolates from the western coast of the Greenland Ice Sheet
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … Finding the RNA virus snowflakes in the snowstorm of genomic data involved developing special computational …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms … relationships than other algae, Auxenochlorella ’s reduced genomic complexity can accelerate the design-build-test … enables production strategies that optimize either solar-driven or fermentation-based oil synthesis. Since the genome …
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