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… in our new Strategic Plan , which was released in April 2024 — through serving an increased number of users with a … A record number of primary users — 2,475 — had active proposals with us, along with more than … who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around … is here .) Working with the JGI, Banfield is a pioneer in metagenomic studies, recovering microbial genomes from biofilm …

… precise gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an … oil production. The organism uses specific chemical tags on DNA  to control which genes are active. Researchers … and Environmental Research program under award no. DE-SC0023027 (to SSM and JLM) with support from the Gordon and …

… (Module 1), Experimental Design and Sample Metadata (Module 2), Sample Collection and Processing (Module 3), Data … Integrative Organismal Systems - Plant Biotic Interactions 2029168 award. This material is based upon work while SB was …

… microbiomes. Scientists conducted a shotgun metagenomic survey on three types of conifers–limber pine, … of California (UC) Merced scientists conducted a shotgun metagenomic survey of conifer needle microbiomes across six … summer project in the JGI-UC Merced Internship Program. In 2023, Shayna Bennett, a UC Merced graduate student in …

… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire …

… 2022 marks the JGI’s 25th anniversary. Over the last year, … genomics and transcriptomics to discover another advantage these fungi wield: the capacity to form enzyme …

… Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large … Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus …

… Metagenomic datasets could help map out microbial diversity … to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … genes on nearly 2 million genomes, including isolates, metagenome-assembled genomes (MAGs) with varying quality …

… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of Energy …

… approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, including over 28,000 …

… some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. … by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). Support was also …