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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a … over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … is capable of discovering and modelling complex biological sequences such as biosynthetic gene cluster structures. …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have … cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led … minerva bacteriome, pictured at the bottom.  Perhaps most notably, JGI’s Microbial Program head Tanja Woyke …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of nutrients in these systems.” -Mike …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M … working on the effect of plant root exudates in the rhizosphere and microbiome. The rhizosphere is the area … specifically working with a grass plant that’s similar to wheat and rice called Brachypodium distachyon. LaMonika Dent …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of … richardii marks the first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … Some plants and fungi have mutually beneficial (e.g., mycorrhizal) relationships, but not all plants and fungi can form … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone …
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JGI Announces 2023 Community Science Program Awardees
… Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … Laboratory (Berkeley Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of …
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