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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … The proposal targets the CSP focus area in plant microbiomes, as well as those in inter-organismal …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human …
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JGI announces 2025 Functional Genomics awardees
… Kathleen Scott, Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for … Through our  CSP Functional Genomics call , we look for projects that will leverage the JGI's DNA synthesis and … in support of advancing the bioeconomy. This year's project goals range from engineering drought-tolerant woody …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … presence of non-viral genes. Up to this point, there has been a lack of fast and accurate tools for researchers to … scientist Stephen Nayfach, the study’s first author in the Microbiome Data Science group led by Nikos Kyrpides. To …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … way from sequencing to functional characterization, and a project like this — an exciting project — we were able to extend our capabilities, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… (DOE CSGF) program was developed to meet the Nation's growing need for science and technology professionals with advanced computer skills. During the summer of 2016,  DOE CGSF recipient Adam Riesselman … Science Graduate Fellowship Program at http://www.krellinst.org/csgf/ . …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … an estimated 40 to 80 percent of all the microbial cells on Earth. As microbial predators, viruses are able to determine … viral sequences, which would suggest the virus had been infecting the cell. The team assembled 130 genomes from …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two genome … that polyploid evolution is occurring slower than had been expected. “Although every case is probably going to be …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited … and Biochemistry)  Here’s a selection of studies these busy bees contributed to:  Giant bacteria visible to the naked … article detailing how forest floors, in particular the soil microbiome, recover post-wildfire . He and  Tringe were also …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … efforts with diversity, equity and inclusion in mind. Microbiome ecologist Shade became Director of Research at … Genomics of Energy & Meeting. Any investigator who has been an active user of the JGI at any time in the past two …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … terpenes play in nature. The research collaboration has been incredibly productive; more than 10 papers, including … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a zinc-mirror heme site ties heme availability to … 10, 2743-2769. 2015 Blaby et. al., The Chlamydomonas genome project: a decade on. Trends in plant science . 19: 10, …
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