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JGI announces 2024 New Investigator portfolio
The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … 5, which contains about 6% of the human genome . They discovered genes linked to conditions such as cardiovascular …
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Janey Lee
… support for custom single-cell user projects and projects within the group. …
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What Happens Underground Influences Global Nutrient Cycles
… for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national user … to both algae and land plants.  Within the biogeochemistry group, one of the four proposals selected is led by Eoin … reaction networks, and also assessing the role of viruses in the soil microbiome. Another accepted proposal in …
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Picking Up Threads of Cotton Genomics
… time, the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … extremely pleased with Jeremy, Jane and their team. Many groups assemble genomes, but very few do it so well that it …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … much damage to the hosts, but they are carriers of several viruses (e.g., Lettuce big-vein associated virus LBVaV; … et al . In both studies, however, Olpidium was unexpectedly grouped with non-flagellated terrestrial fungi, but not with …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … outside of the area of focus of most of the rest of the group, which made it feel like I had something tangible to …
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Hiroshi Otani
… activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … family transcriptional regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. Otani, H., …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … to have demonstrated the potential of ferns as sources of novel genetic material with applications including …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy … graduate student in the Quantitative Systems Biology (QSB) Group under the School of Natural Sciences (SNS). During his …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … complete this task. Improving the download process for this group of users offered the promise of an immediate benefit. …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly sorted, whole genome amplified, … was similar across the dominant lineages, each microbial group displayed vastly different recombination profiles. …
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