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Leo Baumgart
… to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing … Matthew J. Blow et al. "Persistence and plasticity in bacterial gene regulation." Nature methods 18, no. 12 (2021): 1499-1505. Hasty, Jeff, Leo Alexander Baumgart, Scott …
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JGI@25: The Little Alga That Could
… a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the lab relegated … of arctic-growing Chlamy. Merchant continues to work on the tiny alga with a mighty impact. Her lab has sequenced four … streamlining those gene names speaks to the impact of this tiny, single-celled organism as a model system. “People name …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along …
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Workforce Development & Education Outreach
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing … Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene … The Impact This discovery creates a powerful platform for producing specialty oils, chemical feedstocks and industrial …
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Evolution of a Fungal Gene Expression Regulator
… bioenergy feedstock development. Summary With the aim of producing at least one reference genome for every family of … (MTase) variants. Using new sequencing technologies for producing both reference genomes and epigenomics, …
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Ian Blaby
… worked with a wide range of eukaryotic algae, archaea and bacteria with a view to developing a deeper understanding of … site ties heme availability to carbon metabolism in cyanobacteria Nature Communications 15(1) 3167. 2024 Simirenko et … in Bioengineering and Biotechnology. 11. 2023 Liu et. al., Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that …
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You Can Move, But You Can’t Hide
… viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  … platform. The Impact In order to gain more insights into Earth’s ecosystems, researchers must examine the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs …
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Refining the Process of Identifying Algae Biotechnology Candidates
… On the list of candidate bioenergy feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report …
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A Sorghum Pangenome Opens More Doors to Discovery
… bioproducts. Historically, work on sorghum has focused on producing high-quality reference genomes. By cataloguing a … many reference genomes and sequences together at once, producing a pangenome resource for sorghum , recently … and analysis methods within the JGI’s plant program. By producing more genomes of higher quality each year, the JGI …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
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