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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as …
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Three pairs of fungal Trametes strains isolated from distinct geographic origins show conserved genomic features and adaptive response to plant biomass
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Training the Next Generation of Talent
… Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … challenges UC Merced graduate students with individual projects at the DOE JGI that provide hands-on experience in … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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Cultivating Symbiotic Antarctic Microbes
… to that of a free-living organism. First discovered in 2011, Nanohaloarchaea are part of the DPANN (Diapherotrites, … outlined by JGI scientists and their collaborators in 2013. While most DPANN lineages are predicted symbionts, the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that …
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Access to Rock Star Scientists
… Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … Wint, UC Merced JGI Mentors: Igor Grigoriev & Asaf Salamov, Fungal Program “Working at the JGI has reinforced my plans …
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Viruses Reprogram Cells into Different Virocells
… In  their study , which appeared in  The ISME Journal , they focused on how virus-infected microbes are … in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… oceans or soils.  A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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A Natural Mechanism Can Turbocharge Viral Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, throws open … (NERSC), a U.S. Department of Energy Office of Science User Facility operated under Contract No. DE-AC02-05CH11231. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … out to characterize the transcriptome – the complete set of RNA molecules transcribed from all the genes within a cell … of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … the previous year and continue working on their research project! The JGI-UC Merced internship program was founded in …
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JGI Announces 2026 Functional Genomics Recipients
… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI's biodesign and omics … U.S. energy independence and secure domestic supplies of materials essential to a growing bioeconomy. The JGI is a DOE Office of Science national scientific user facility supported by the Biological and Environmental …
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