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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … along with its life cycle. For most bacteria, their DNA floats freely within the cytoplasm of their cells. This … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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Access to Rock Star Scientists
Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … Wint, UC Merced JGI Mentors: Igor Grigoriev & Asaf Salamov, Fungal Program “Working at the JGI has reinforced my plans …
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THE Bioenergy Tree
… poplar an economical and sustainable source of energy and materials. …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … to look at gene expression in both plant cells and fungal cells. Using a technique called single nuclei RNA …
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JGI on the 2020 Highly Cited Researchers List
Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism may … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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A Natural Mechanism Can Turbocharge Viral Evolution
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National … the discovery of more than 30,000 DGRs in this analysis, a 20-fold increase over what was previously known, throws open … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … Cited Researchers list assembly by Clarivate Analytics. In 2020, she was named a Yellowhammer Woman of Impact.     … Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human chromosome 19 The DNA …
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