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A Complex Confection Decoded: Sugarcane Reference Genome
… from the genome could help scale sustainable sugarcane conversion technologies for  biofuels and other bioproducts. … partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and …
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Ben Bowen
… – Arizona State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 … NIH K25 Mentored Career Development awardee 1998-2003: NSF Graduate research training fellowship in biomolecular … Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National … Focus Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: …
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Massie S. Ballon
… partners, and collaborators.  Ms. Ballon is a molecular biology-trained science communicator with extensive … LBNL Biosciences Area Organizational Stewardship committee 2020: Lawrence Berkeley National Laboratory Director’s Award … Program Bachelor of Arts, Wesleyan University, Molecular Biology & Biochemistry …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… industrial processes.  To increase the interest in urine diversion processes, JGI and Foundry researchers sought other, … to make, and it could be sold in the United States for $50-200, generating a potential profit of $1.4 million … U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231. Work at the Molecular Foundry was supported by …
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Trent Northen
… Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had leadership roles within large … Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … Genome Engineering Enables Rapid Activation of Biosynthetic Gene Clusters. Nat Microbiol. 4(12):2498-2510. …
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Tracing the Evolution of Shiitake Mushrooms
… from around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 … Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the Americas to trace the evolution … of Lentinula species.The Lentinula genus diverged roughly 28 million years ago, when the largest mammal …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz …
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Ancient Algae Reveal Secrets of Plant Evolution
… three strains of  Zygnema circumcarinatum . Published  May 2024 in  Nature Genetics by an international research … US National Science Foundation (NSF) CAREER award (DBI-1652164, 1933521), the Nebraska Tobacco Settlement Biomedical Research …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … in bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. … Publications …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen …
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Benjamin Cole
… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Selected Publications …
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