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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … perspectives on what the next five years of innovation could look like. In one article, Micro-Scale Applications … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … data set will help identify how different elements of the ecosystem interact and respond to changes in the … This research was sponsored by the U.S. Department of Energy, Office …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI … at Lawrence Berkeley National Laboratory (Berkeley Lab), comes in. The JGI is uniquely positioned to enable this kind … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … expression when the fungus is present. The Impact Black cottonwood, or poplar, ( Populus trichocarpa ) is the … This work was supported by the Plant-Microbe Interfaces program at the …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … an experienced researcher who serves as their mentor. By contributing to projects that will help them build skills …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … This work received funding by the Alfred P. Sloan foundation (grant number G-2017-9955), the …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss … genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … This work was supported by NSF DEB-1541005 and start-up funds from UF …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. …
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The fungus that made itself at home
… Retracing how the dry rot Serpula lacrymans adapted to a new ecological habitat. The Science By comparing genetic … plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … This research was supported by the University of Oslo and Norwegian …
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