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… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … as a principal investigator through the Community Science Program — as well as through the Facilities Integrating … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …

… development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for … Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work with Nadia … how we think of things that we thought we knew everything about,” said Lovell.  In future work, a pangenome offers …

… amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE mission, … At the 2021 JGI Annual Meeting, David Lowry talked about a multi-year study his student conducted involving fungal rust pathogen resistance. Just as the common gardens …

… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study elaborated on … she said. Listen to study co-author Dan Udwary talk about genome mining using the GEM catalog in  this episode …

… sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. … cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through … Lax, Carlos, Stephen J. Mondo, José F. Martínez, Anna Muszewska, Leo A. Baumgart, José A. Pérez-Ruiz, Pablo …

… The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence Berkeley National …

… is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using CRAGE, JGI … practice ideas presented in a  Trends in Biotechnology  review piece by Yoshikuni and JGI colleagues Jing Ke and … group of bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …

… health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence Berkeley National … researchers were studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked … completing the human genome, the JGI became a national user facility. The staff and resources shifted to offering …

… wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of videos produced by JGI … at the end of the summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring …

… Kaushal Sharma, one of five Antioch High School rising juniors … Kaushal‘s mentor, described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …

… specific conditions – in over a dozen plants. To learn more about the project, HudsonAlpha’s Research Communication … It was developed to improve plant genome annotations at the US Department of Energy (DOE) Joint Genome Institute (JGI)*, … Faculty Investigator Jeremy Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this …

… Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … under the Facilities Integrating Collaborations for User Science (FICUS) initiative through an award to MBD and …