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… DAN: You’re listening to the US Department of Energy Joint … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of …

… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … After your proposal is approved, the Contracts Officer will send required paperwork to your …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae …

… Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …

… DAN: You’re listening to the US. .Department of Energy Joint … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways …

… “Adopt a Genome” is an informal program for faculty to … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist … at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of …

… Uncovering associations between plant roots and fungi that can help or … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …

… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA …

… Data produced and released by the US Department of Energy (DOE) … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … Embargo : A period in which data is not publicly available in … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as …

… Tracking evolution of symbiotic lifestyles across multiple … fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …