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… were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …

… and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is often found in transposable … genome. Many plant pathogens such as the fungi that cause poplar leaf rust, are rich in transposons, which may help … 5mC in fungi could help researchers find ways to protect poplar and other crops being considered for bioenergy …

… system. [ Go here to learn more about Cameron Currie’s metagenomics research, enabled in part by JGI’s Community … have something to do with it. We saw hints of a rare advantage. So if you’re not the most popular pathogen, you can … whether it be you know, fighting with each other through antagonism or working synergistically or just tolerating each …

… genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …

… marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned … end of last year. Dan: So these are going to be seaweed metagenomes? You’re sequencing everything? Brad: Metagenomes …

… which species of mycorrhizal fungi are important for poplar plant health, in part to learn how these species can modulate their behavior in the presence of other fungi. Poplar is a  JGI Flagship Plant , of interest as a …

… metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of … Assembly, annotation ( IMG/M ) Depends on project Metagenome Minimal Draft Low-coverage short-read assembly & …

… a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the … the strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, …