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Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing …
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What Happens To a Rainforest When You Dial Up Drought?
… happens to that storage when a rainforest hits a drought. Tag along with their experiments in a fully enclosed, human-made ecosystem: Biosphere 2.      …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Natural Prodcast Episode 10: A Primer on Genome Mining
… found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …
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Tapping the treasure trove of atypical phages
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Protocols
Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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Partnerships: Adopt-A-Genome
Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven … some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes …
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Natural Prodcast Episode 9: Roger Linington
Yeah, that’s right. We were postdocs together in the mid 2000s, I guess. You were working for Brad Moore. I was … the idea that you could go internationally to do the next stage of your training and that there might be more to be … how best to begin. And so in the end, we did it in several stages. So we started out internally by making a list on the …
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Natural Prodcast Episode 5: Brad Moore
Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …
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Webinars on Offerings & Capabilities
Photon Source when applying to the FICUS call. (Feb. 21, 2024) More JGI webinars below …
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