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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You can review … are open to both domestic and international applicants from any institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage …
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Community Science Program
… projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome … researchers to discover novel lineages of life and move from the identification of microbial novelty to assigning … to a new appreciation for the extent of diversity. The phylogenetic and functional characterization of this novel …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … Horonobe Underground Research Laboratory, Hokkaido, Japan. From samples of both environments, they used fluorescence  … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … the capabilities across at least two of the facilities, and generate datasets beyond what each of these facilities could … FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project …
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Natural Prodcast Episode 17: Cassandra Quave
The guest we have this week is Professor Cassandra Quave from Emory University, with joint appointments in the School … curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … bioprospecting vs biopiracy, early stage drug discovery in general, and a possible data-driven future for plant natural …
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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What Happens To a Rainforest When You Dial Up Drought?
Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling …
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Natural Prodcast Episode 2: The Primer, Part 2
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … is a bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … that produces those. So it’s not a hard and fast rule, but, generally, animals do not have secondary metabolism that we …
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