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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint … thing. Another way to approach it is more related to what JGI does, which is sequence genomes. And we just published … And then you ask the question of whether that second copy exists, or there is some evidence that might start …
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JGI Announces 2023 Community Science Program Awardees
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … very excited to start working with this years’ crop of CSP recipients, over half of which are first-time PIs on a … inter-organismal interactions, understanding natural communities important for carbon storage, nutrient cycling, …
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Natural Prodcast Episode 22: Alison Narayan
… … DAN UDWARY: Hey everyone. Welcome back to Natural Prodcast. This … niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … to have that catalyst that will work to– or at least have a shot at it, right? To plan that in and make that a solid …
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Synthetic Biology Lab
… and assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the production of large, difficult to … or environmental applications.  We are interested in:  characterizing novel enzymatic activities using phylogenomic …
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Natural Prodcast Episode 17: Cassandra Quave
… … Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … people aspects of things, because a lot of what we do at JGI in terms of the sequencing that we do is very … QUAVE: So the other thing that we do on the ground with the communities themselves is really think about what are their …
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Who We Are
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in …
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Plant-Microbial Interactions Group
… viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, … expand beyond this model system by identifying phages and characterizing this multipartite phenomenon in additional … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for … These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam … of the innovative research  being proposed by this year’s CSP investigators,” said Tanja Woyke, Deputy Director of …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A collaborative team led by researchers at the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered …
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Natural Prodcast Episode 2: The Primer, Part 2
… 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … why we are still sequencing lots of stuff, and why the JGI is a key driver in some of the science. ALISON: Very …
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