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PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities
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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks
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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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JGI on the 2021 Highly Cited Researchers List
… of webinars featuring aspects of the Integrated Microbial Genomes & Microbiomes (IMG/M) Nikos Kyrpides was part of an … viruses, understand the role of viruses in natural ecosystems, and functionally explore viral genetic diversity … seminars focus on experimental innovations, computational advances, and other technological developments that will …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… it possible for researchers to get a close look at more ecosystems and organisms than ever before. In 2006, the JGI … describes it, JGI researchers have also collaborated to advance computing infrastructure and analysis. This way, JGI … ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community Science …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… the conifer needle microbiome. The phyllosphere, which is known as the aerial surface of plants, is a comparatively … the assembly, function, and the behavior of microbiomes to advance their utility across the bioeconomy. The study shows … analysis of mobile genetic elements across all of the metagenomes. Learn more about her time at the JGI here . Bennett …
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as reference genomes are critical to serve as phylogenetic anchors for …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … them. Based on data reported in the April issue of Soil Biology and Biochemistry , the team found that fungi are … nitrogen and using it as an energy source. No fungi are known to be able to do this. JGI and EMSL’s contributions …
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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