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… Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the … Varga et al (2019) Megaphylogeny resolves global patterns of mushroom evolution. Nature Ecol Evol . … and lignocellulose degradation encoded in the genome sequence of  Schizophyllum commune . Nat Biotech.  2010; 28: …

… a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 pathway, which … National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led …

… MGEs based upon their gene content and their genetic sequences. The software was created by researchers under the … is poised to become an essential tool for researching global viral diversity. geNomad has already been downloaded …

… tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein … their predicted functional and metabolic roles across global metagenomes (within IMG).  The Impact The initial … Those similarities, based on their ratios of small DNA sequence fragments called tetranucleotides, are a way to …

… cell. Several years later, the continuing single cell sequencing collaboration between the JGI and Bigelow Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. Combining single cell … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … species. The 62 mycorrhizal species include 29 newly-sequenced mycorrhizal genomes. With so many fungal  genomes …

… value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of … remain unknown. In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the …