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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … of the technical aspect of her project, Hour mentioned that she had gained knowledge in bioinformatics and machine …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… ditched their flagella and other traits when migrating back to the ocean. The Science Scientists have discovered … bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other forms of  Chloroflexota … in pesticides and refrigerants. Researchers found a number of surprising traits in  Dehalococcoidia inhabiting hot …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. … researchers were able to map the location of genes that provide resistance to the brown rust disease that can …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! … of scientific achievement and original contributions that have advanced microbiology. Academy Fellows are eminent …
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Three Join the JGI User Executive Committee
… Executive Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and … providing input and advice on JGI policies and practices that affect users and their access to technical capabilities …
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When “The Blob” Made It Hotter Under the Water
… communities in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … marine microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … Dehalococcoides mccartyi and  Dehalobacter restrictus,  that work together to break down PCE into the chemical … that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made … In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 … Now, a recent study published in Microbiome has uncovered that SAR324 encompasses four subgroups, adapted to different …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from metagenomes. The Science Through the … , researchers have developed and improved upon a tool that combines existing DNA sequence binning algorithms, … other methods. The Impact Understanding how individual microbes interact with each other in a community, and …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … tetraploid, with four sets of chromosomes; the study showed that these sets descend from two now-extinct progenitors. … of Biological and Environmental Research under Award Number DE-SC0018420. The work conducted by the U.S. Department …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil … stay largely dormant under standard conditions. As described in a recent issue of mSystems , scientists found that adding salt to the growth medium caused Streptomyces …
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