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Understanding Wildfire Recovery, Starting in Soil
… a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … the US Forest Service, New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery … to understanding how these microbes respond and adapt to environmental changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s …
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology … at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar … on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       …
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2025 Progress Report
… Mi Yan, Deanna Beatty)    Vision  Lead AI-driven genomic innovation to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include … The Deputy of Operations provides oversight and leadership of JGI … to JGI administrative and financial management, facilities, environmental health and safety, and business issues. …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … govern ecosystems. These organisms carry out important environmental processes like  carbon fixation , nitrogen …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … to enable great science that will help solve energy and environmental challenges. Viruses are everywhere — in soil, …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … to enable great science that will help solve energy and environmental challenges. Chlamydomonas is a single-celled … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
… is currently a postdoctoral fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah University of Science and Technology (KAUST) in Saudi Arabia. …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic reprogramming. The … from The Ohio State University and the University of Michigan studying how virus infections cause significant … Berkeley National Laboratory (Berkeley Lab), and the  Environmental Molecular Science Laboratory (EMSL), a DOE …
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