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MGM Workshop at Fisabio Summer School 2025
… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …
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Access to Rock Star Scientists
Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and really open to … helpfulness and patience of my JGI PIs, having lots of data to play around with.” …
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User Programs
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User Advisory Committees
… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Computationally Classifying Fungal Lifestyles
… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team … S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley National … of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized … screwdrivers in a toolkit. This way, these important tools are always around, regardless of malfunction or …
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NeLLi — Symposium on New Lineages of Life
… of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel microbial … approaches to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the … and a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. … sequence information to BER-funded activities of plant systems that make use of these resources will present on …
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JGI Workshops at PAG
… sequence information to BER funded activities of plant systems. We will describe how to apply for a project with …
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Game On: High School Students Drive Everglades Metagenomics Study
… through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to pull out … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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