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The Case for Conservation
… “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant … The moss genomes’ metabolic pathways could lead to the discovery of genes that could be used for multiple … comprise a full third of each moss genome, and are almost four times the size of the next largest chromosome. As the …
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Metagenomics
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JGI Announces 2026 New Investigator Portfolio
… accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and share our tools with … these researchers will harness capabilities including metagenomics, metatranscriptomics and genome assembly to …
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Rex Malmstrom
… His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … in metabolically active, membrane-bound organelles. Science  376,1453-1458 Nuccio et al 2022 . HT-SIP: a … unicellular marine predators.  PNAS 116 (41), 20574-20583 Couradeau, J.S. et al. 2019. Probing the active fraction of …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… For bacteria, that salty, slightly stinky air is a rich source of the sulfur they need to grow and divide. Similar to … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … with understanding enabled by Basic Energy Sciences (BES) programs, they were able to multiply the insights that each …
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Picking Up Threads of Cotton Genomics
… underscores its value and importance in the fabric of our lives. In the United States, cotton production centers … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … portal  Phytozome , which is a community repository and resource for plant genomes. They are annotated with the JGI …
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JGI on the 2020 Highly Cited Researchers List
… in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 researchers working in 21 fields … assess and improve the quality of metagenome-assembled viral genomes. The paper appeared in  Nature Biotechnology . … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Berkeley Lab, screened … chemistry in their organisms of interest — accelerating discovery of bio-based chemicals and materials that …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about … UC Berkeley Haas School of Business DOE Oppenheimer Science and Energy Leadership …
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Mieux connaître les virus présents sur Terre grâce aux métagénomes
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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins that can …
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