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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — with an …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore the chemistry of … brings some new approach or some new way of thinking or technology, that’s usually very beneficial to the field. …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample … Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … BS in Biochemistry and Cell Biology, University of California, …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …
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Trent Northen
… is currently a Senior Staff Scientist at Berkeley Lab. Since joining Berkeley Lab in 2008, Dr. Northen has had … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … in bacteria. Proceedings of the National Academy of Sciences of the United States of America 109(3), 805–810 …
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