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… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …

… in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (FICUS) collaborative science initiative between the JGI and EMSL.  …

… Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging …

… row]: John Sedbrook, Viktoria Steck, Ning Sun, Olena Vatamaniuk, Setsuko Wakao, Meng Wang, and Allison Werner.   A … 20 proposals were selected by the Joint Genome Institute (JGI) and the Molecular Foundry (TMF) for their collaborative … Biological and Environmental Research (BER) program, the JGI provides advanced genomic capabilities and access to …

… to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Volland and colleagues, including researchers at the JGI and Berkeley Lab, LRC, and at the Université des …

… bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Genomes to Structure and Function focus area of the JGI’s DNA Synthesis Science Program help advance DOE …

… show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …

… As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …

… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since …

… food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …

… and importance in the fabric of our lives. In the United States, cotton production centers around two varieties: 95 … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the …

… Metagenomic datasets could help map out microbial diversity hotspots Over … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite …