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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides … Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … roughly 5-7,000 years ago and has been well-studied by many researchers for nearly five decades. In these frigid … collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix … (DOE). (Poplar is a Flagship Plant.) To engineer them, researchers need to select and breed cultivars for the next …
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Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT)
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Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10T)
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! … plant genomes. She has appeared on the annual Highly Cited Researchers list assembly by Clarivate Analytics. In 2020, …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer …
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Refining the Process of Identifying Algae Biotechnology Candidates
… [subhed -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of … biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide … often by starting with identifying the right ingredients. Researchers collaborating across multiple institutions have …
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The Case for Conservation
… “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … crosses. The work wraps more than a decade of working with researchers at the U.S. Department of Energy (DOE) Joint …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a … of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari Patrinos , Former Director of DOE’s Office of Biological and Environmental Research “There are two kinds of scientific revolutions,” …
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Dan Rokhsar
… in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards … a Professor of Genetics, Genomics and Development after his research interests shifted from condensed matter physics to …
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