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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … the collective power of more than 26,000 microbiome datasets, all accessible through the publicly available  … Integrated Microbial Genomes & Microbiomes (IMG/M) database, they successfully crafted the Novel Metagenome …
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Igor Grigoriev
… Lankiewicz et al (2023) Lignin deconstruction by anaerobic fungi.  Nature … World’s Most Influential Scientific Minds, 2014-2023 Lawrence Berkeley National Laboratory Director’s Award …
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VEGA Symposium
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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Secrets of the Needles: What Microbes do on Conifer Leaves
… varied across both sites and host tree species, with geographic site exerting the stronger influence. Although no … summer project in the JGI-UC Merced Internship Program. In 2023, Shayna Bennett, a UC Merced graduate student in …
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How to Submit Sequencing Samples
… 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or entered into a web … See our Taxonomy Quick Guide. PM sends PI the sample metadata spreadsheet to fill out (or provides a link to complete …  You will receive automated emails as raw sequence data becomes available, and as analysis is completed.   …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… advanced genomic capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) …
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Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032
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Changes to virus taxonomy, the international code of virus classification and nomenclature, and the ICTV statutes ratified by the International Committee on Taxonomy of Viruses (2025)
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Mateus Fiamenghi
… and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… results this year by assembling a collection of large datasets that will enable scientists to explore and collect data in new ways,” she said. “We’re excited to be able to … for the first time these large environmental  microbial data sets for JGI users, which include projects looking at …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study … the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes …
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