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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … disease, and biotechnology. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked …
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Plant-Microbial Interactions Group
… phenomenon in additional plant and bacterial species of bioenergy importance. … We are using cutting-edge single-cell … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: Katsuma Yonehara (Tokyo University) …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community … as a supplementary file.     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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Fungus Fuels Tree Growth
… hardwood tree in the western United States, making it an energy feedstock of particular interest to the U.S. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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Viruses Reprogram Cells into Different Virocells
… within their ecosystems. Summary Microbes drive the energy and nutrient cycles that fuel the planet, and viruses … U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a DOE Office of Science User Facility located at Pacific Northwest National Laboratory (PNNL). Researchers have the …
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Gut Fungi: Unexpected Source of Novel Chemicals
… oxygen — just like we do. Oxygen is a rich source of energy, and because anaerobic fungi can’t harness it, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (EMSL), a DOE Office of Science user facility at Pacific Northwest National Laboratory. The team’s research at both …
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Environmental Genomics Group
Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Institute for Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest …
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Gene Expression: From On-Off Switch to Dial
… systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary Life is all about balance. This … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … expert curation of human gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote research efforts expanded to include basal …
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