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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable biotechnology discoveries. (Pictured from …
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single …
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Tina Clarke
… (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area … Partner, June 2017 –  present Sr. Compensation Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June 2017 – present Berkeley National …
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Mapping Heat Resistance in Yeasts
… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … grew well; the survivors had their DNA sequenced at the JGI as part of a 2014 Community Science Program project. The …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … analysis capability available through the  Community Science Program (CSP) . This includes mass … analyses? A:  This can be requested through the  JGI/EMSL FICUS user program .  Q:  Is it possible to use these …
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Better Genome Editing for Bioenergy
… to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Berkeley.  Organizing this workshop, too, was collaborative. Bruce Hungate and Egbert Schwartz of Northern …
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … meetings of the three teams it was clear that a larger collaborative effort would be far more effective in … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Picking Up Threads of Cotton Genomics
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … added. “We must be careful who we ask to take on these projects due to their difficulty and complexity, but we have …
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