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The Power of One, Amplified
… in, on, and around the planet remain unknown. In recent years, advances in sequencing technologies and bioinformatic … diverse than those within more moderate ecosystems. A few years ago, a candidate bacterial lineage was identified from …
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Waiting to Respire
… ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… rely on enzymes that have been evolving for billions of years. However, these enzymes are often loosely understood, … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified … that even enzymes that evolved separately for billions of years have some common signatures of muli-substrate …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, …
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A Community Resource for Secondary Metabolite Researchers
… expediting BGC and biosynthesis research.  Summary Over the years several secondary metabolites databases have been made …
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Katherine Louie
… analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and … genomic data (MAGI) for functional annotation and identifying unknown compounds (Pactolus). … B.S in Biomedical …
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When “The Blob” Made It Hotter Under the Water
United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures by a few …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… that adapted to marine environments hundreds of millions of years ago.  The Impact Chloroflexota are bacteria that act …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… and filtering water. Peat formed there over thousands of years sequesters more carbon than all other vegetation types … peatlands in the face of a warming climate. Identifying these sex chromosomes and their role in sphagnum’s …
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Ben Bowen
State University, Bioengineering & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 … Rubel, O., Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry …
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Marine Microbe Contains Multitudes
… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …
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Making a Lichen Together
… that in this symbiosis going back hundreds of millions of years, accidental gene swaps via horizontal gene transfer … and Policy (for DNA sequencing and assembly); by a three-year subcontract to DA, FL, and FD (for bioinformatics) from a DOE grant No 112442 to Pacific Northwest National Laboratory; and by a …
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