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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary … Episode Transcript … This the second episode of Natural Prodcast, which continues a conversation from the first episode . …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place … Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers … structures within cells. This is the largest dataset of its kind ever assembled. The team identified 15 core … due to features like self-splicing introns and multiple genetic codes. Adding to the challenge, mitochondrial …
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for … sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been used in 15 individual … started to help expand limited opportunities for students developing skills in fungal biology and genomics. Fungi can …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and … mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … in both the carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced … Pathogens Shayna Bennett and mentor Robert Bowers, Mobile Genetic Elements and CRISPR Spacers in the Conifer Needle …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for … Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … This research was sponsored by the U.S. Department of Energy, Office … BioScales project on JGI Genomes Online Database …
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Rearrangement of a Large Novel Pseudomonas aeruginosa Gene Island in Strains Isolated from a Patient Developing Ventilator-Associated Pneumonia
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Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis
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