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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … their work. It’s fun to be around people who are generous with their time and like nerding out about the big stuff, … patience of my JGI PIs, having lots of data to play around with.” …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of the microbial communities in the environmental samples without needing to isolate individual organisms, using … (MAGs) directly from sequenced environmental samples without needing to cultivate the microbes in the lab,” noted …
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Membrane Bioreactor Pretreatment of High-Salinity O&G Produced Water
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The evolution of sperm and non‐sperm producing organs in male Drosophila
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic …
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Environmental Genomics Group
… lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture … Clum, A. et al. (2021)  DOE JGI metagenome workflow …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … located at Lawrence Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding …
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Microbial Genomics & Metagenomics (MGM) Workshop
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) … sequence data and enables the user to analyze these data with existing bioinformatic methods to bridge the gap from …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria … bacteria instead go through a boom and bust cycle aligned with light availability. A long-running time-series study … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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David Goodstein
With a background in experimental and computational surface … equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … expanded to include basal metazoans and plants. Working with a talented team of scientists and software engineers, …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi … and trees to grow. However, fire changes the microbes within the soil. To get a clearer picture of how burned … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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A bacterial pioneer produces cellulase complexes that persist through community succession
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