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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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A Natural Mechanism Can Turbocharge Viral Evolution
… allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … opportunity to study how DGRs work and develop more of them into new biological tools. … The work conducted by the U.S. …
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Igor Grigoriev
… genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 … genomics workshops. … Igor Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about … Proc Natl Acad Sci U S A. 113(35):9882-7. Kohler et al  (2015) Convergent losses of decay mechanisms and rapid …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … large and giant viruses offered the researchers insights into how they might interact with their hosts, and how those …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
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Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … I hope they can walk away from this project empowered to go into college and seek out opportunities that they might have …
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Green Algae Reveal One mRNA Encodes Many Proteins
… reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples … gene prediction algorithms. I decided to dig in a little deeper, and realized what was really happening,” recalled … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … to thrive outside aquatic environments. The Impact A deeper understanding of how plants adapted to terrestrial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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