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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to … this to untangle which microbes ate the compound and how much they ate.  These analyses provide granular insight into … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … over 1.8 million bacterial and archaeal genomes to see how much of their diversity we've actually captured,” said …
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JGI Welcomes New UEC Members
… the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect … procedures and the organization of the JGI Annual Meeting. Any investigator who has been an active user of the JGI …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … leaving potential targets for crop engineering untouched. Research recently published in  The Proceedings of … Wisconsin-Madison as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Data Policy & Support
… practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth … 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took effect in six San …   … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D … in situ kinetic histochemistry. Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The … part of the flora, fire moss has adapted to conditions such as UV irradiation, heavy metal contamination, and … working with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The … is part of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist …
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Introducing New Members of the JGI User Executive Committee
… “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here to view the full roster of members. …
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