Search

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … Along with highlighting the viruses in a given sample, metagenomics shed light on another key aspect of viruses in …

… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they are “polyploid”) and their complex … factor in developing sugarcane as a sustainable bioenergy feedstocks. Summary Sugarcane is a cultivated crop that very …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … environmental challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its drought and flood …

… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, hosted three undergraduates …

… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene …

… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as well as …

… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing … tracking, and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has … BS in Electrical Engineering, University of New South Wales, Australia; MS in Computer …

… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …

… and supporting applications that span the lifecycle of activities at JGI - proposal submission and review, … automated sequence quality control and automation of microbial/metagenomic assemblies, portals that make data available to … BS in BioEngineering, University of California, Berkeley …

… Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … a single-cell-based discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable …

… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Software …

… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …