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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … over 27,000 microbial genes. These genes were identified based on their potential to efficiently degrade …
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A Complex Confection Decoded: Sugarcane Reference Genome
… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …
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Building Sphagnum Genomic Resources
Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … and researchers estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the … of University of Massachusetts-Amherst, who represent the scientific areas of plant genomics, DNA synthesis and …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese … 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … Lawrence Berkeley National Laboratory Outstanding Scientific Achievement Award (2022) ASM’s USFCC/J. Roger …
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