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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the human language—are well positioned to help enhance our understanding of life’s genomic code, advancing DOE … problems,” Wang said. “We are also seeking to work with biotechnology companies including the bioeconomy space, trying …
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Rex Malmstrom
… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. … his postdoctoral work at the Massachusetts Institute of Technology he developed a high throughput approach for …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional … researchers to submit white papers to the Community Science Program’s  Functional Genomics call for proposals .  … Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … the University of California, San Diego. As the Sequencing Technology Implementation Lead, he directs a … and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His …
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The JGI Data Portal: Improving User Experience
… agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal … around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases … needs. Over its 23-year history, JGI has produced more than 13 petabytes of data, accessible through the Genome Portal. …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … many species able to occupy the regions where eelgrass flourishes. The plant can thrive in both frigid and tropical … the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Berkeley Lab, screened … Research program’s efforts in advancing genome-based biotechnology.  Researchers studying Streptomyces species or …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, along with … seed dispersal in wild populations for the first time.  “To our knowledge, nobody has ever discovered a dispersal gene …
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Boosting Small Molecule Production in Super “Soup”
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … able to make the same amount of a product in just eight hours that growing cells take three days to make, which is a … said. “We’re exploring not just what can be enabled by this technology, but also what we can understand through this …
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Toward More Efficient Artificial Photosynthesis
… and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using … current natural processes and use it as a sustainable resource for making high-value bioproducts. As a step toward … composition variants. Summary In the  May 8, 2020 issue of  Science , a team led by Tobias Erb, director of the MPI for …
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Charting Progress toward Professional Goals
… experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of … program at UC Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while … important to know who you're talking to and, like, know your audience and cater what you're saying to the audience, …
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