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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program … proposals come from investigators who have not previously been a principal investigator (PI) on an approved JGI … Program . For example, green algae represent the largest group of primary producers generating organic compounds through …
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Inaugural Critical Minerals & Materials Joint Research Portfolio Announced
… Jeffrey Marlow;  [Row 2]: N. Cecilia Martinez-Gomez, Sabeeha Merchant, Sergey Nuzhdin, Stephanie Porter, Claire … to advance their DOE mission-relevant science.   Supported by the Biological and Environmental Research (BER) … capabilities and access to large-scale data resources. Supported by the Basic Energy Sciences (BES) program, the …
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JGI@25: Studying Sorghum’s Survival Skills
… and the first C4 crop to be fully analyzed. 2014: The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. To support growing sorghum and other C4 plants for biofuel … received its fifth update. Another 31 varieties have also been sequenced, and the EPICON studies are still informing …
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JGI Announces 2023 Community Science Program Awardees
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A Sorghum Pangenome Opens More Doors to Discovery
… Lab).  A resource for the field(s) Sorghum has long been one of the JGI’s  Flagship Plants , on the short list … of the BTx623 reference genome. This cultivar has been the reference since 2009. In the United States, BTx623 … States Agency for International Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… has a rich back story — they rely on enzymes that have been evolving for billions of years. However, these enzymes … that we studied are involved in transfer of the amine group, or the N group, to a variety of different molecules. So they’re involved …
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Four Researchers Join JGI User Executive Committee
… Four researchers have been elected to the User Executive Committee of the Joint … body, providing input on JGI policies and practices that support its user community. The breadth of scientific … of microbiology to the broader community. Eisen has been involved in many JGI projects, both as a CSP PI and as …
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JGI-KBase Panel at SACNAS
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Tracing the Evolution of Shiitake Mushrooms
… mushrooms are white rot fungi, belonging to an elite group of decomposers that can break down all of wood’s … still roamed central Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in … P450s. This includes the species L. raphanica, which has been able to adapt to habitats from Alabama to Brazil, …
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Fishing for Novel Cellulose Degraders
… to attract specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. … caught several microbes from known cellulose-degrading groups, the researchers also hooked and were able to … Institute, a DOE Office of Science User Facility, is supported under Contract No. DE-AC02-05CH11231. The work was …
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Webinar: PhycoCosm Tutorial
… Do you publish the data sets the trees are based upon? A: This is still work in progress as new genomes are … to contact us for multiomics visualization as we want to support you in getting these data on our system. If it’s not … genome with itself, to identify regions that might be duplicated? A: Yes, we do routinely calculate …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… The Impact For decades, the liverwort  M. polymorpha has been used as a model for evolutionary studies. Its place … lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) Joint Genome … ), a DOE Office of Science User Facility, is supported by the Office of Science of the US Department of …
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