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… usually visible without the assistance of microscope. “It’s 5,000 times bigger than most bacteria. To put it into … conducted some microscopy studies over the next couple of years, and realized it was a sulfur-oxidizing prokaryote. … the study, performed the 16S rRNA gene sequencing to identify and classify the prokaryote. “I thought they were …

Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key components of Gene …

UC Berkeley, Leadership and Development Program Awardee 2005-2009: NIH K25 Mentored Career Development awardee 1998-2003: NSF … Rubel, O., Prabhat, Mahoney, M., & Bowen, B. (2015). Identifying important ions and positions in mass spectrometry …

… assay with RNA sequencing, they were able to identify the target genes of 11 sigma factors in Streptomyces … and cellular differentiation. The tough part is identifying the set of genes associated with any particular … of whole transcriptomes, and the third is determining the 5’-ends by 5’-end sequencing, from which those promoter …

Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research groups. The team … Having a better handle on the gene function helps identify the molecular targets for plant improvement. …

CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial … active secondary metabolites and helping them identify and describe the functions of the biosynthetic gene … User Facility, is supported under contract DE-AC02- 05CH11231. …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to … due to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence …

… large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot spring … in, on, and around the planet remain unknown. In recent years, advances in sequencing technologies and bioinformatic … diverse than those within more moderate ecosystems. A few years ago, a candidate bacterial lineage was identified from …

… ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce …

… rely on enzymes that have been evolving for billions of years. However, these enzymes are often loosely understood, … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, … plant, fungi and animal. This analysis led them to identify 2,938 putative AT  genes. Within the AT genes identified …

… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, …

… expediting BGC and biosynthesis research.  Summary Over the years several secondary metabolites databases have been made … of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. … SMC is the most comprehensive BGC database …