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A Community Resource for Secondary Metabolite Researchers
… an interactive public database for the research community. With more than 13 million BGCs in the catalog at the time of … The Impact Secondary metabolites are useful in a variety of fields including biotechnology, medicine and agriculture. … experience in developing a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes …
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Refining the Process of Identifying Algae Biotechnology Candidates
… seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide so they … recipes can be refined for best results, often by starting with identifying the right ingredients. Researchers … was supported by the Bioenergy Technology Office (BETO) within the Department of Energy’s Office of Energy …
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Honey Bee Gut Microbiota Divvy Up Dinner
… two polysaccharides can yield sugar monomers, it’s only with the aid of specialized bacterial enzymes. Honey bees … down hemicellulose. The authors think this might have to do with the differences in lifestyle: honey bees need ample … and analyzing the honey bee gut metagenome, which was done with the help of the US Department of Energy Joint Genome …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less salt — near the surface where algae grow. Armed with a better understanding of the alga’s stress resistance … range of habitats — from brine pockets and melt pools, and within the water column. They are also the primary producers …
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2024 Progress Report
… April 2024 — through serving an increased number of users with a record output of products, making data easier to … number of primary users — 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of our … Our primary objective is to serve our user community with large-scale advanced genomic capabilities. This year we …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… our  2022 Annual Meeting . The meeting was a hybrid event, with guests joining onsite at the Integrative Genomics … delved into algae blooms and the alga-viral interactions within them; and Susan Wessler of UC Riverside, who … UC Berkeley colleague and longtime JGI collaborator Jill Banfield approached Doudna with repeated genetic sequences …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of genomics, structural biology, bioimaging, and … in 2022, the delegation from UDE familiarized themselves with the research programs and user facilities at Berkeley …
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Open Frameworks Training the Next Generation of Scientists
… for both student and faculty researchers. Aligning with this overarching goal, Myco-Ed is a partnership … microbiome data. Undergraduate educators are partnering with the JGI and KBase to tap into their existing … with potential biotechnology applications in a range of fields including agriculture, ecosystem health, and medicine …
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Forming Scientific Connections and Building Community
… had to say about their experiences and what they’ll take with them as they go forward in their careers.   Listed … Being an intern here has allowed me to make connections with the top of the top scientists in their fields. I have learned so much in terms of scientific …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome … on Actinobacteria ( Actinomycetota ), a group of bacteria with diverse metabolic activities. Found in marine and … via antimicrobials) – and could have applications in many fields. The team discovered that rampant horizontal gene …
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The Power of One, Amplified
… cells harbored mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with respect to the amount of within species recombination, … the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to biotechnology and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… program and current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution … project, Visel explained. She continued working virtually with her JGI mentors for nearly three years after her … others may be useful in the biofuel and synthetic biology fields. In a living cell, triplets of nucleotides, or …
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