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Model Fern Reveals Insight into DNA Thievery in Ferns
… Ceratopteris richardii on Phytozome data portal … Datasets …
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Computationally Classifying Fungal Lifestyles
… of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team … S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, they also built a …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… We work with start-ups and mature companies, as long as the data are not proprietary. In addition, the JGI has a … instrumental support, how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained to handle the huge amounts of data for each of the different analysis? A:  We go from …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational … advanced genomic capabilities, large-scale AI-ready data and professional expertise to support the global …
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User Programs
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… results showed that these fungi may be able to provide tools beyond biomass breakdown, extending into biochemical …
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Introducing New Members of the JGI User Executive Committee
… in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … unaware that [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently analyzed use-restricted data without contacting the lab that generated that data,” …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… in his 25th Anniversary presentation. “Those driven by new tools and those driven by new concepts.” Patrinos went on to … one second. “It isn’t just the generation of vast troves of data, it’s the new areas of scientific possibility that …
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Promoting the Power of Viral Metagenomics
… published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people … viruses that were present in the sample. From these data it is possible to answer a wide variety of important …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale projects at … The accepted proposals will lead to large-scale AI-ready data to support the global research community. See below for …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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