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Rex Malmstrom
Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within … Boston University ( magna cum laude ) … Serrano et al. 2024.  Spatial co-transcriptomics reveals discrete stages of …
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Finding the Fermenters
… function of these two isolates. The combined taxonomic and functional annotations were used to predict the final end products from … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … of work; as sequencing technologies advanced, assembly and annotation of the genome sequence improved in parallel. The …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the system allows scientists to test … and enzymes that were once trapped inside are now, still functional, in a kind of biomolecular soup. The soup permits …
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2024 Progress Report
… in our new Strategic Plan , which was released in April 2024 — through serving an increased number of users with a … our work on four strategic themes: Nutrient Cycling, Functional Diversity, Data and Connectivity and Stewarding …
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You Can Move, But You Can’t Hide
… understand ecosystem-wide processes. Summary geNomad is an annotation and classification framework that combines and … Science User Facilities operated under Contract No. DE-AC02-05CH11231. This work also received support from the Genomic …
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Toward More Efficient Artificial Photosynthesis
… them to test composition variants. Summary In the  May 8, 2020 issue of  Science , a team led by Tobias Erb, director … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of … compounds through a light-driven process. The JGI’s  CSP Functional Genomics call is open year-round, and reviews …
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The JGI announces 2024 awardees for our Community Science Program annual call
… excited to announce the fifteen scientists selected for our 2024 Community Science Program Annual Call. “It’s exciting to … as smaller-scale calls including our New Investigator and Functional Genomics calls, here on our website . See below …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects … call, as well as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below …
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Making a Lichen Together
Their partnership is widespread and cosmopolitan: more than 20,000 ascomycete species and hundreds of microalgae are … Facility. Grigoriev and his team at the JGI contributed to annotation of the genomes, available online at  PhycoCosm … … This work was supported by an intramural seed grant (IGSP 2008001) to DA, FL, and FD from the Duke Institute of …
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JGI Announces 2023 Community Science Program Awardees
… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of … five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… these gaps of knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal …
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