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… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … Collaboratory (SMC) has launched as an interactive public database for the research community. With more than 13 … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

JGI-led team significantly expands the global diversity of … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including data from several DOE-mission relevant proposals through …

Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … the research question and applied it to such a large data set, but also went all the way through to convert her …

For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic … … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, …

All participants and staff of the JGI events are required to adhere to the following Code of …

… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … find genetic regions of interest.” The combination of field data and genetic information has allowed the research team … cutting-edge genomics and genetic analysis with large scale data collection,” he added. Jeremy Schmutz , head of the  …

On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library …

… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio …

Clum, A. et al. (2021)  DOE JGI metagenome workflow …