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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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DAS Tool for Genome Reconstruction from Metagenomes
… genomes from sequences generated from environmental samples. The work aligns with the ETOP mission of providing JGI users with the most current technology and expertise in … with >90% completeness. These results, noted JGI User Programs Deputy Susannah Tringe , suggest that extracting …
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Simon Roux
… to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome (MIUViG). …
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Atif Shahab
… This platform streamlines project management, laboratory information tracking, and enables efficient analysis and … status. Mr. Shahab has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, and …
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JGI on the 2020 Highly Cited Researchers List
… microbial draft genomes generated from environmental samples around the world. Much of the data had been generated from samples provided by more than 200 scientists and sequenced … for  M. sinensis can both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such …
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Training the Next Generation of Talent
… Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … project had him developing a framework that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the cell. The team assembled 130 genomes from their sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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You Can Move, But You Can’t Hide
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … Lab), with computing resources provided by NERSC, another user facility at Berkeley Lab. geNomad is now accessible … easy to use interface allows beginners and experienced users to import their data and access the geNomad tool to …
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A Grass Model to Help Improve Giant Miscanthus
… allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy feedstock crops such … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … copies, will help researchers improve Miscanthus breeding programs. The team also sequenced genomes of numerous wild …
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Finding the Fermenters
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … They then used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on …
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Team Science Reveals Important Protein in Poplar
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, and is supported by the Office of Science of … Synchrotron Light Source II, a U.S. DOE Office of Science User Facility operated for the DOE Office of Science by …
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