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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … and help cultivate new user communities. Biomolecular materials initiative. Pairing the JGI’s genomic capabilities …
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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and … DOE relevant cellulosic feedstocks. He provides scientific project management for the reference eukaryotic genomes … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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SPRUCE-ing Up Science
… . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and although the … to develop a tool that leveraged machine learning to help users determine which computer program would best serve … communities,” Wang said. Wang, a vocal advocate on the importance of giving scientific presentations, maintains …
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … the previous year and continue working on their research project! The JGI-UC Merced internship program was founded in …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a … limited to: Public data: datasets associated with completed projects that are eligible for public release, have … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to … (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort …
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JGI Announces 2026 Functional Genomics Recipients
… Through our CSP Functional Genomics call , we look for projects that will leverage the JGI's biodesign and omics … U.S. energy independence and secure domestic supplies of materials essential to a growing bioeconomy. The JGI is a DOE Office of Science national scientific user facility supported by the Biological and Environmental …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every …
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JGI Announces 2025 New Investigator Portfolio
… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel research projects from PIs who have not led any previously accepted … for this ongoing call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November …
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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … Lab), with computing resources provided by NERSC, another user facility at Berkeley Lab. geNomad is now accessible …
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