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Exometabolomic Analysis of Cross-Feeding Metabolites
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated platform for tracking JGI's sequencing projects … laboratory information tracking, and enables efficient analysis and reporting of sequencing projects and their … BS in Electrical Engineering, University of New South Wales, Australia; MS in Computer Science, …
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An integrated workflow for phenazine-modifying enzyme characterization
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … and bioenergy production. Together with resequencing of 1,984 cultivars and landraces, these data capture the diversity … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … energy and environmental challenges. Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are among … article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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