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Better Genome Editing for Bioenergy
… work? The project was a multi-institutional effort led by then-graduate student Cory Schwartz and his advisor Ian … bp) that directs the endonuclease where to cut, but these “single guide” RNAs (sgRNAs) can be faulty. Without a good … of  Y. lipolytica ’s genes to be required for growth. By contrast, an initial screen using an unvetted library …
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Ancient Algae Reveal Secrets of Plant Evolution
… plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … land. Key gene groups involved in stress tolerance and multicellularity enabled plants to develop complex structures and … circumcarinatum . Published  May 2024 in  Nature Genetics by an international research consortium led by the …
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Picking Up Threads of Cotton Genomics
… crops. Additionally, cotton is almost entirely made up of cellulose and it is a fiber model to understand the … field, growers can easily distinguish the cotton species by traits such as flower color, plant height, or fiber … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome … analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and … in state-of-the-art analytical methods in this area, by means of theoretical lectures and seminars as well as …
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Nandita Nath
… in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA …
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JGI-UC Merced Interns Share Their 2021 Experiences
… the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in … Polymorphisms Created by Transposable Elements … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii Mutant Library …
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Forming Scientific Connections and Building Community
… research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds … that work here.” Mentor: Lorenzo Aureli Project: “ Exploring the epigenetic basis of pathogenicity in bacteria” … Project: “ Improving biosynthetic gene cluster annotation by leveraging a large genomic model ” Leonel Gonzalez : …
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What Happens Underground Influences Global Nutrient Cycles
… mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library … group, one of the four proposals selected is led by Eoin Brodie of Lawrence Berkeley National Laboratory … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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Improving the Cacao Genome and Phytozome
… cacao  – the tree that produces cacao beans – was released by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team at the  HudsonAlpha Institute for … genome for  T. cacao has now been completed and released by HudsonAlpha scientists, with the help of funding from …
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You Can Move, But You Can’t Hide
… entities that seek to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are … and their genetic sequences. The software was created by researchers under the direction of Microbiome Data … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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Game On: High School Students Drive Everglades Metagenomics Study
… and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about … a deeper understanding of both the research process and metagenomics while legitimately contributing to the body of scientific knowledge that can be accessed by the rest of the community. These high school students now …
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