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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Better Genome Editing for Bioenergy
… To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… intern summer has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … writing while also making new connections with both researchers and other interns. At the end of the summer, …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of … the scientific questions asked and whether they are within DOE mission areas of bioenergy, carbon cycling, and … contact us if you would like to share your data with other researchers 13.  Q: Is it possible to download predicted …
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Steven Wilson
… applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order … of microbial/metagenomic assemblies, portals that make data available to the public, and our institutional … align and reach the associated goals. Mr. Wilson joined the JGI in 2002.  A fter supporting the sequencing core at …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data …
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An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity
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Help from Citrus’ Bitter, Hardier Cousin
… go unripened and a blotchy yellowing of leaves, a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , researchers have developed and improved upon a tool that … Interpretation (CAMI) Challenge, a competition launched in 2015 by a community initiative, with varying numbers of …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI … panel for the JGI’s Director, CIO, and Deputies. The IAC does not perform management functions, nor does it direct the JGI CIO or the JGI Director on how to …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… on lakewater samples — so this episode is a look at how researchers get these specialized snapshots of a freshwater …
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