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An Enzyme System to Help Catalyze Bioproduction of Plastic
… the building blocks of many of our fuels and materials.  With an eye to harnessing these nitrogenase-like enzymes, … the enzyme operates. It works as a two-part complex, along with a regulatory accessory protein and multiple … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Computationally Classifying Fungal Lifestyles
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved … as part of the 1000 Fungal Genomes Project supported by the JGI Community Sequencing Project # 662 . …
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Promoting the Power of Viral Metagenomics
… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … of 100 times the size of what has typically been associated with viruses, while the genomes of large viruses may be only … the researchers insights into how they might interact with their hosts, and how those interactions may in turn …
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Picking Up Threads of Cotton Genomics
… fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green pods in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … years ago. Studying the cotton genomes provides breeders with insights on crop improvements at a genetic level, …
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Taking Stock of the Known and Unknown Microbial Space
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dongying Wu, a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out … expanded the estimated diversity of Bacteria and Archaea With phylogenetic diversity standing in as a representative …
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Boosting Small Molecule Production in Super “Soup”
… (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make … University describe a two-pronged approach that starts with engineered yeast cells but then moves out of the cell … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced genome, and these gardens allow …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking … the key physiological factors that trigger forest mushrooms with diverse trophic modes to convert from vegetative …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the …
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Trent Northen
… Berkeley Lab in 2008, Dr. Northen has had leadership roles within large DOE-funded research programs using mass … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … research is focused on using metabolomics to link genomes with environments to understand how webs of microbes cycle …
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